Review Article

The serotonin-gated 5-HT3 receptor: a tale of functions and structures of a prototypical pentameric ligand-gated ion channel

Zhong-jie Ye1, Chen-yang Wu1,2, Hang Zhang1,3,4, Hua-wei Zhang1, Horst Vogel1,5,6
1 Center for AI-Driven Medical Research, Institute of Biomedicine and Biotechnology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
2 University of Chinese Academy of Sciences, Beijing 100049, China
3 State Key Laboratory of Microbial Technology, Shandong University, Qingdao 266237, China
4 Shandong Provincial Key Laboratory of Deep Sea Bioresources Exploration and Utilization, Shandong University, Qingdao 266237, China
5 Faculty of Pharmaceutical Sciences, Shenzhen University of Advanced Technology, Shenzhen 518055, China
6 Institut des Sciences et Ingénierie Chimiques (ISIC), Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
Correspondence to: Hua-wei Zhang: hw.zhang@siat.ac.cn, Horst Vogel: horst.vogel@epfl.ch,
DOI: 10.1038/s41401-026-01763-3
Received: 20 September 2025
Accepted: 25 January 2026
Advance online: 11 March 2026

Abstract

Serotonin-gated 5-HT3 receptors (5-HT3Rs), which belong to the cys-loop superfamily of ligand-gated ion channels, mediate fast excitatory neurotransmission in the central and peripheral nervous system. They are targets for drugs to treat neurological diseases and psychiatric disorders, as well as chemotherapy-induced and postoperative nausea and emesis. The ever-increasing number of resolved 3D structures of the homopentameric form of 5-HT3AR, in combination with new computational approaches allow us to better understand the molecular processes of ligand binding, the subsequent conformational changes, and ion permeation, providing a solid foundation for understanding the biological functions of 5-HT3AR and its heteropentameric 5-HT3R homologs. In this review, we first outline the physiological roles and subunit assembly of heteromeric 5-HT3Rs, which predominate in vivo. We then summarize the latest structural insights into the 5-HT3AR, revealing details of its architecture, ligand-binding sites, and conformational transitions leading to channel activation. Finally, we discuss the evolving pharmacology of 5-HT3R modulators and provide our perspectives on future research directions aimed at resolving the heteropentameric structures of 5-HT3R in their native membrane and developing modern drugs targeting these receptors.

Keywords: serotonin-gated 5-HT3 receptor; ligand-gated ion channel; structure and function; signal transduction; electrophysiological properties; drug target; allosteric conformational change; homopentamer and heteropentamer

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