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Design, synthesis and pharmacological characterization of N-(3-ethylbenzo[d]isoxazol-5-yl) sulfonamide derivatives as BRD4 inhibitors against acute myeloid leukemia

Mao-feng Zhang1, Xiao-yu Luo2, Cheng Zhang3, Chao Wang3,4, Xi-shan Wu3, Qiu-ping Xiang3, Yong Xu3,5,6, Yan Zhang3
1 College of Pharmacy, Taizhou Polytechnic College, Taizhou 225300, China
2 Guangzhou Younan Technology Co., Ltd, Guangzhou 510663, China
3 Center for Chemical Biology and Drug Discovery, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China
4 University of Chinese Academy of Sciences, Beijing 100049, China
5 State Key Laboratory of Respiratory Disease, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China
6 China-New Zealand Joint Laboratory on Biomedicine and Health, Guangzhou 510530, China
Correspondence to: Mao-feng Zhang: zhang_maofeng@163.com, Yong Xu: xu_yong@gibh.ac.cn, Yan Zhang: zhang_yan2012@gibh.ac.cn,
DOI: 10.1038/s41401-022-00881-y
Received: 12 October 2021
Accepted: 25 January 2022
Advance online: 9 March 2022

Abstract

BRD4 plays a key role in the regulation of gene transcription and has been identified as an attractive target for cancer treatment. In this study, we designed 26 new compounds by modifying 3-ethyl-benzo[d]isoxazole core with sulfonamides. Most compounds exhibited potent BRD4 binding activities with ΔTm values exceeding 6 °C. Two crystal structures of 11h and 11r in complex with BRD4(1) were obtained to characterize the binding patterns. Compounds 11h and 11r were effective for BRD4(1) binding and showed remarkable anti-proliferative activity against MV4-11 cells with IC50 values of 0.78 and 0.87 μM. Furthermore, 11r (0.5−10 μM) concentration-dependently inhibited the expression levels of oncogenes including c-Myc and CDK6 in MV4-11 cells. Moreover, 11r (0.5−10 μM) concentration-dependently blocked cell cycle in MV4-11 cells at G0/G1 phase and induced cell apoptosis. Compound 11r may serve as a new lead compound for further drug development.

Keywords: acute myeloid leukemia; BRD4 inhibitors; 3-ethyl-benzo[d]isoxazole; c-Myc; CDK6; apoptosis

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