Article

Tigecycline suppresses colon cancer stem cells and impairs tumor engraftment by targeting SNAI1-regulated epithelial-mesenchymal transition

Antonio Jesús Ruiz-Malagón1,2, María Jesús Rodríguez-Sojo1,3, Jorge García-García3,4, Ailec Ho-Plagaro3,4, Federico García3,5,6, Teresa Vezza3,4, Eduardo Redondo-Cerezo3,4, Carmen Griñán-Lisón3,7,8, Juan Antonio Marchal3,9, María Elena Rodríguez-Cabezas1,3, Alba Rodríguez-Nogales1,3, Julio Gálvez1,3,10
1 Department of Pharmacology, Center for Biomedical Research (CIBM), University of Granada, 18071 Granada, Spain
2 Instituto de Investigación Biomédica de Málaga y Plataforma en Nanomedicina-IBIMA Plataforma BIONAND, 29590 Málaga, Spain
3 Instituto de Investigación Biosanitaria de Granada (ibs.GRANADA), 18012 Granada, Spain
4 Servicio de Aparato Digestivo. Hospital Universitario Virgen de las Nieves, 18012 Granada, Spain
5 Servicio Microbiología, Hospital Universitario Clínico San Cecilio, 18100 Granada, Spain
6 Centro de Investigación Biomédica en Red de Enfermedades Infecciosas (CIBERINFECC), Instituto de Salud Carlos III, 28029 Madrid, Spain
7 Department of Biochemistry and Molecular Biology 2, Faculty of Pharmacy, University of Granada, Campus de Cartuja s/n, 18071 Granada, Spain
8 Centre for Genomics and Oncological Research, GENYO, Pfizer/University of Granada/Andalusian Regional Government, 18016 Granada, Spain
9 Department of Human Anatomy and Embryology, Biopathology and Regenerative Medicine Institute (IBIMER), Center for Biomedical Research (CIBM), University of Granada, 18016 Granada, Spain
10 Centro de Investigación Biomédica en Red de Enfermedades Hepáticas y Digestivas (CIBEREHD), Instituto de Salud Carlos III, 28029 Madrid, Spain
Correspondence to: María Elena Rodríguez-Cabezas: merodri@ugr.es, Alba Rodríguez-Nogales: albarn@ugr.es, Julio Gálvez: jgalvez@ugr.es,
DOI: 10.1038/s41401-025-01629-0
Received: 17 January 2025
Accepted: 1 July 2025
Advance online: 12 September 2025

Abstract

Cancer stem cells (CSCs) play a key role in the progression of colorectal cancer (CRC). The high heterogeneity of CSCs has hindered the clinical application of CSC-targeting therapies. Tetracyclines are drugs with therapeutic potentials beyond their antibiotic activity. We previously demonstrated the efficacy of tigecycline, a third-generation tetracycline, against a model of colitis-associated colorectal cancer, primarily focusing on its immunomodulatory role with a preliminary assessment of its impact on stemness. In this study we characterize the effects of tigecycline on colon CSCs in vitro and in a CRC xenograft model, with special attention on the signaling pathways involved and the modulation of the gut microbiota. We generated secondary colonospheres from two colon tumor cell lines HCT116 and CMT93, and evaluated the effect of tigecycline on CSCs properties. We showed that tigecycline (25, 50 μM) effectively reduced colon CD133+CD44+LGR5+ALDH+ subpopulations and their viability, self-renewal and migratory capacity. Moreover, tigecycline treatment hindered epithelial-mesenchymal transition (EMT) process through targeting SNAI1 and β-catenin, resulting in an upregulation of epithelial markers (E-cadherin) and a downregulation of pluripotency and mesenchymal ones (Vimentin, N-cadherin, SOX2, NANOG, MIR155, MIR146). This effect was confirmed in two independent CRC-xenograft murine models in which tigecycline administration led to a reduction in tumor volume. Finally, CRC samples were taken from HCT116 xenograft model mice for analysis of CSCs-related signaling pathways and stools were collected for gut microbiome metagenomic analysis. We found that the antibiotic modulated gut dysbiosis by increasing the abundance of beneficial bacterial species such as Parabacteroides sp., which were involved in metabolic pathways that hindered SNAI1-Wnt-β-catenin signaling. These results reinforce the new role of tigecycline in the therapy of CRC and demonstrate for the first time the effect of tigecycline on colon CSCs and their malignancies.

Keywords: colorectal cancer stem cells; tigecycline; epithelial-mesenchymal transition; SNAI1; microbiota; secondary colonospheres

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